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proteome  (ATCC)
97
ATCC proteome
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Proteome, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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proteome - by Bioz Stars, 2026-03
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fetal osteoblast cell line  (ATCC)
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ATCC fetal osteoblast cell line
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Fetal Osteoblast Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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fetal osteoblast cell line - by Bioz Stars, 2026-03
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u 251 mg glioma cell line  (ATCC)
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ATCC u 251 mg glioma cell line
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
U 251 Mg Glioma Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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u 251 mg glioma cell line - by Bioz Stars, 2026-03
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stage iii iv periodontitis  (ATCC)
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ATCC stage iii iv periodontitis
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Stage Iii Iv Periodontitis, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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esaiassen 2018  (ATCC)
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ATCC esaiassen 2018
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Esaiassen 2018, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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esaiassen 2018 - by Bioz Stars, 2026-03
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256 v61a h129q r97g e1759 2018 urethral  (ATCC)
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ATCC 256 v61a h129q r97g e1759 2018 urethral
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
256 V61a H129q R97g E1759 2018 Urethral, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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256 wt silent c237t wt da1775 2018 cervix  (ATCC)
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ATCC 256 wt silent c237t wt da1775 2018 cervix
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
256 Wt Silent C237t Wt Da1775 2018 Cervix, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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report  (ATCC)
97
ATCC report
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Report, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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zhang 2018 a niger atcc  (ATCC)
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ATCC zhang 2018 a niger atcc
A ) Venn diagram of unique proteins identified in the in vitro cellular <t>proteome</t> (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, <t>Cryptococcus</t> <t>neoformans</t> (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.
Zhang 2018 A Niger Atcc, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


A ) Venn diagram of unique proteins identified in the in vitro cellular proteome (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, Cryptococcus neoformans (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.

Journal: bioRxiv

Article Title: Systematic Infectome–Phenome Profiling Reveals Cryptococcal Infection-Associated Proteins Driving Immune System Remodeling and Immunization Potential

doi: 10.64898/2026.01.30.702846

Figure Lengend Snippet: A ) Venn diagram of unique proteins identified in the in vitro cellular proteome (purple; 2767 proteins) and secretome (blue; 18 proteins) with 25 proteins commonly detected. B) Egg diagram of proteins identified from the host, Mus musculus (4,952 after valid value filtering), and pathogen, Cryptococcus neoformans (874 after valid value filtering) from infectome analysis. C) Principal component analysis of infectome experiment. D) Volcano plot for comparison of host proteins with significant differences in abundance between infected (teal) and uninfected (grey) conditions. Student’s t test, P < 0.05; FDR = 0.05; S 0 = 1. E) Comparison of significantly different fungal proteins identified from the in vitro cellular proteome compared to the infectome. F) Comparison of significantly different fungal proteins identified from the in vitro secretome compared to the infectome. Red lines represent 0-, 4-, and 16-fold change in protein abundance. G) Pie chart based on GOBP for 53 fungal infection-associated protein (percentage of each category represented). Experiment completed in biological triplicate.

Article Snippet: The derived peak list was incorporated with the Andromeda search engine against the reference C. neoformans var. grubii serotype A (strain H99/ATCC 208821) proteome (7430 sequences; Oct. 2018) and Mus musculus (55,462 sequences; Oct 2018) from Uniprot .

Techniques: In Vitro, Comparison, Infection, Quantitative Proteomics